Human Data Sets


TissueConsortium/LabSample AccessionSource SexPublication
DRGPrice LabPrice LabPrice LabPrice Lab
Frontal CortexGTExSRA: SRR1413562,SRR1432123Femalehttp://www.nature.com/ng/journal/v45/n6/abs/ng.2653.html
HeartENCODEENCODE: ENCFF001RTS,ENCFF770NYAMale, Femalehttp://www.ncbi.nlm.nih.gov/pubmed/?term=25413365
HippocampusGTExSRA: SRR1348339,SRR1348424Femalehttp://www.nature.com/ng/journal/v45/n6/abs/ng.2653.html
LiverENCODEENCODE: ENCFF187OKVMalehttp://www.ncbi.nlm.nih.gov/pubmed/?term=25413365
LungGTExSRA: SRR820596,SRR821302Femalehttp://www.nature.com/ng/journal/v45/n6/abs/ng.2653.html
Nucleus AccumbensGTExSRA: SRR598196,SRR598253Femalehttp://www.nature.com/ng/journal/v45/n6/abs/ng.2653.html
Tibial NerveGTExSRA: SRR1312622,SRR1312802Femalehttp://www.nature.com/ng/journal/v45/n6/abs/ng.2653.html
Skeletal MuscleRoyal Institute of TechnologyENA: ERR579149,ERR579152,ERR579141Unknownhttp://www.ncbi.nlm.nih.gov/pmc/articles/PMC4854704/
Small IntestineUConnSRA: SRR1957202Femalehttp://www.nature.com/nature/journal/v521/n7552/full/nature14475.html
Spinal CordGTExSRA: SRR1330498,SRR1369219Femalehttp://www.nature.com/ng/journal/v45/n6/abs/ng.2653.html
Caudate NucleusGTExSRA: SRR598428,SRR1332856Femalehttp://www.nature.com/ng/journal/v45/n6/abs/ng.2653.html
Whole BloodGTExSRA: SRR614503,SRR607042Femalehttp://www.nature.com/ng/journal/v45/n6/abs/ng.2653.html
Whole BrainENCODEENCODE: ENCFF850ZLYFemalehttp://www.ncbi.nlm.nih.gov/pubmed/?term=25413365

Mouse Data Sets


TissueConsortium/LabSample AccessionSource SexPublication
DRGGerhold, BerkleySRA: SRR869621,SRR869620,SRR869619Femalehttp://www.ncbi.nlm.nih.gov/pmc/articles/PMC3559429/
Frontal CortexRakic, YaleSRA: SRR1646331,SRR1646335Malehttp://www.ncbi.nlm.nih.gov/pmc/articles/PMC4491803/
HeartENCODEENCODE: ENCFF001IVS,ENCFF001IVUUnknownhttp://www.ncbi.nlm.nih.gov/pmc/articles/PMC4260565/
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4308717/
HippocampusRakic, YaleSRA: SRR1646331,SRR1646335Malehttp://www.ncbi.nlm.nih.gov/pmc/articles/PMC4491803/
LiverENCODEENCODE: ENCFF001JAT,ENCFF001JAW,ENCFF001RTN,ENCFF001RTDUnknownhttp://www.ncbi.nlm.nih.gov/pmc/articles/PMC4266106/
LungENCODESRA: SRR453156,SRR453157,SRR453158,SRR453159Unknownhttp://www.ncbi.nlm.nih.gov/pubmed/25413365
http://www.ncbi.nlm.nih.gov/pubmed/25582907
Nucleus AccumbensEipper-MainsSRA: SRR647495,SRR647501,SRR647498Malehttp://www.ncbi.nlm.nih.gov/pubmed/23094851
Olfactory EpitheliumRakic, YaleSRA: SRR1646337,SRR1646333Malehttp://www.ncbi.nlm.nih.gov/pmc/articles/PMC4491803/
Skeletal MuscleSandstromSRA: SRR545833,SRR545834MaleN/A
SmallIntestine(1)ENCODEENCODE: ENCFF996KVOFemalehttp://www.pnas.org/content/111/48/17224.long
SmallIntestine(2)ENCODEENCODE: ENCFF001JLL,ENCFF001JLQUnknownhttp://genome.cshlp.org/content/21/9/1543.short
Spinal CordWuSRA: SRR789190,SRR789191Femalehttp://journals.plos.org/plosone/article?id=10.1371/journal.pone.0072567
StriatumKonopkaSRA: SRR1630726,SRR1630727,SRR1630725Malehttp://genesdev.cshlp.org/content/29/20/2081.short
Whole Brain(1)ENCODEENCODE: ENCFF286WTQMalehttp://www.pnas.org/content/111/48/17224.long
Whole Brain(2)LivnySRA: SRR1818187MaleN/A
Whole BloodLevySRA: SRR1774203,SRR1774204,SRR1774205,SRR1774206Unknownhttp://msb.embopress.org/content/11/4/799.abstract