SIPID - Functional Genomics of Blood Disorders

Cohort 2 – FIRST YEAR (Summer 2008)

SIPID INSTITUTE WEEK 1

Sunday July 6

Arrival at UT Dallas for Housing Assignments

Morning - Didactic

Afternoon - Bench Training

Monday, July 7

Orientation - Review SIPID program

Mentor-Mentee research planning

9:00 am

Mentor-Mentee Introductions

Grant Ideas Explored

Review SIPID program goals

Career Planning

Role of Mentor, Mentee, SIPID staff

Group Discussion - networking

Group Lunch

RECEPTION - SIPID Team

Tuesday, July 8

Gene Regulation

Electroporation

9:00-10:30 am

Recombinant DNA technology

Transient Transfection

Peterson

Peterson

Wednesday, July 9

Luciferase Assay

Protein Isolation, Bradford

9:00-10:30 am

Peterson

Pace

Thursday, July 10

Red Blood Cell Physiology

SDS PAGE of RBC Ghosts

9:00-10:30 am

Cell Membranes

Spot picking and in-gel digestion

Goodman

Kakhniashvili

Friday, July 11

Proteomics

Peptide sample preparation

9:00-10:30 am

Mass Spectrometry

Tandem Mass Spectrometry

Goodman

Kakhniashvili

Saturday, July 12

Mass Spectrometry data analysis

MS/MS data analysis

9:00 am-until

Kakhniashvili

Kakhniashvili

Sunday, July 13

FREETIME

COHORT 2 SIPID INSTITUTE WEEK 2

Morning - Didactic

Afternoon - Didactic

Monday, July 14

Human Genome Project

Probe Labeling

9:00-10:30 am

Gene Expression Profiling-Microarray

Chip Hybridization

Pace

Pace

Tuesday, July 15

Microarray chip scan -

Database Searches

9:00 am

Microarray Data Analysis

Computer Lab- Database Search

Story & Ding

Levene

Wednesday, July 16

Grants Writing Workshop

Grant Review Process

9:00 am

Types of Grants

Research Funding Sources

Werner

Werner

Thursday, July 17

Mock Study Section

URMs in Biomedical Research

9:00 am

Summary Statement & Resubmission

Group Discussion

Werner

DeLisser, Werner, & SIPID Staff

Friday, July 18

Proper Research Conduct

Dixon

Saturday July 19

DEPARTURES

SIBR, Summer Institute of Biomedical Research

II.  SIPID –  Functional Genomics of Blood Disorders Curriculum

Cohort 1 –  SECOND YEAR (Summer 2009)

SIPID INSTITUTE WEEK 1

Sunday July 20

Arrival at UT Dallas for Housing Assignments

Morning - Didactic

Afternoon - Bench Training

Monday,  July 21

Second Year Orientation

Epigenetic DNA modifications

Mentor-Mentee Meetings

Cell Inductions/Transfections

Welcome Lunch

Bresnick

Tuesday, July 22

ChIP/Double ChIP assay

ChIP assay

Bresnick

Bresnick

Wednesday, July 23

Genome-wide ChIP applications

ChIP: qPCR Analysis

Bresnick

Bresnick

Thursday, July 24

FACS advanced applications

FACS I sorting

Huang

Huang

Friday, July 25

FACS Sorting II

FACS Sorting Data Analysis

Huang

Huang

Saturday, July 26

ELISA Laboratory

Group Outing

Pace

To be Determined

Sunday July 27

FREETIME

COHORT 1 SIPID INSTITUTE WEEK 2

Morning - Didactic

Afternoon – Didactic

Monday, July 28

Grammar & Writing Skills II

Leading from the Inside Out: Six Steps to Blazing New Trails as a Scientist

Dixon

Ambrose

Tuesday, July 29

Research Project Development

Grants Writing Workshop

Study Section and Beyond

Review Funded Grants

Pace

Wednesday,  July 30

Grant Review Process

Summary Statement, Resubmission

Research Funding Sources

Group Discussion

Werner

Thursday,  July 31

DEPARTURES

SIPID Summer Institute Schedules

Cohorts

Year

Arrival Date

Start Date

End date

Departure Date

Duration

1

1

7/15/07

7/16/07

7/28/07

7/29/07

2 weeks

1

2

7/20/08

7/21/08

7/29/08

7/30/08

10 days

2

1

7/6/08

7/7/08

7/18/08

7/19/07

2 weeks

2

2

7/20/09

7/21/09

7/30/09

7/31/09

10 days