Lecture 6
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All living things contain protein catalysts: Enzymes

Lecture Outline

1) Chemical reactions

Rates of chemical reactions : activation energy and transition state

Equilibrium ratio: difference between the energy of product and substrate

Exergonic reactions: energy of the product is less than that of the substrate

Endergonic reactions: energy of the product is greater than that of the substrate

2) Catalysts

Catalysts accelerate the rate of a reactions by lowering the activation energy

Catalysts do not alter the equilibrium ratio of products to substrates

3) Enzymes

Substrate specificity

Substrates into proper orientation and proximity :"tsoo mei" or "marriage brokers" Rates increased many orders of magnitude;

Turnovers: up to 100,000 reactions per second!

4) Enzymes and coenzymes as "surgical teams"

Active site screens patients for adequate insurance (i.e. substrate specificity).

Anesthetize and bind patient (i.e. form an enzyme-substrate complex).

Active site groups remove, join, modify or transplant "molecular organs"

Coenzyme transplant teams (derived from vitamins) carry the molecular organs between donors and acceptors.

"Transplant Team Vitamins"

"Molecular Organs"

Thiamin

Aldehyde groups

Riboflavin and Niacin

Hydrogen molecules

Pyridoxine

Amino groups

Cyanocobalamin (B12)

Methyl groups

Biotin

Carboxyl groups

Folic acid

Formaldehyde and formic acid groups

Pantothenic acid:

Acetyl groups

5) Evidence for evolution from a common ancestor.

Amino acid sequence differences are consistent with taxonomic relatedness.

Common enzyme mechanisms

Common use of the same vitamin-derived coenzymes